Lung_scGraph.log

_lung_
Processing batches, calcualte centroids and pairwise distances

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Skipped batch GRO-01_biopsy, due to < 100 cells
Skipped batch F01506, due to < 100 cells
Skipped batch F01869, due to < 100 cells
Skipped batch GRO-01_nasal_brush, due to < 100 cells
                       Rank-PCA  Corr-PCA  Corr-Weighted
BBKNN                  0.556572  0.666522       0.689886
Harmony                0.632507  0.745527       0.726239
Provided_x_scanvi_emb  0.362053  0.640343       0.599236
Provided_x_umap        0.542785  0.639196       0.665217
Scanorama              0.655628  0.780978       0.749452