Build on Mac OS X problems 2

[esd100]

Cleaned my system, started from scratch again. Pristine system. Installed the latest stable release of gfortran from gcc. Now, I'm having this error with OpenBLAS...Nothing in Make.user. Just basic install.

make[3]: *** [getarch_2nd] Error 1
Makefile:129: *** OpenBLAS: Detecting CPU failed. Please set TARGET explicitly, e.g. make TARGET=your_cpu_target. Please read README for the detail.. Stop.
*** Clean the OpenBLAS build with 'make -C deps clean-openblas'. Rebuild with 'make OPENBLAS_USE_THREAD=0 if OpenBLAS had trouble linking libpthread.so, and with 'make OPENBLAS_TARGET_ARCH=NEHALEM' if there were errors building SandyBridge support. Both these options can also be used simultaneously. ***
make[2]: *** [openblas-v0.2.8/libopenblas.dylib] Error 1
make[1]: *** [julia-release] Error 2
make: *** [release] Error 2

see gist for further details
https://gist.github.com/esd100/9797237

[esd100]

I don't think there is a release candidate for OpenBlas that supports the Haswell architecture on Apple computers. Unfortunately.

[tkelman]

Looks the same as OpenMathLib/OpenBLAS#332 - the fix for which is in v0.2.9.rc2. Try modifying deps/Versions.make and replacing OPENBLAS_VER = v0.2.8 with OPENBLAS_VER = v0.2.9.rc2.
ihnorton's method is better, do what he said.

[ihnorton]

(override OPENBLAS_VER = v0.2.9.rc2 in julia/Make.user will prevent git conflicts)

[esd100]

I will try and get back.

[esd100]

Now, a different problem.

ld: library not found for -lcrt1.10.6.o
collect2: error: ld returned 1 exit status
make[4]: *** [sblat1] Error 1
make[4]: *** Waiting for unfinished jobs....
ld: library not found for -lcrt1.10.6.o
collect2: error: ld returned 1 exit status
make[4]: *** [dblat1] Error 1
make[3]: *** [tests] Error 2
*** Clean the OpenBLAS build with 'make -C deps clean-openblas'. Rebuild with 'make OPENBLAS_USE_THREAD=0 if OpenBLAS had trouble linking libpthread.so, and with 'make OPENBLAS_TARGET_ARCH=NEHALEM' if there were errors building SandyBridge support. Both these options can also be used simultaneously. ***
make[2]: *** [openblas-v0.2.9.rc2/libopenblas.dylib] Error 1
make[1]: *** [julia-release] Error 2
make: *** [release] Error 2

see gist for further details...
https://gist.github.com/esd100/9798472

[tkelman]

ld: library not found for -lcrt1.10.6.o is the exact same error your Fortran compiler had before, just happening in OpenBlas this time instead of Arpack. Are you positive you have a working installation of gfortran that can compile, and more importantly link, simple Fortran programs and libraries?

[esd100]

No, I'm not sure. All I know is that I downloaded this file, http://coudert.name/software/gfortran-4.8.2-Mavericks.dmg, from http://gcc.gnu.org/wiki/GFortranBinaries. I installed GFortran from the dmg. Then ran Julia make.

[nolta]

What's the output of

$ pkgutil --pkg-info=com.apple.pkg.CLTools_Executables

?

[esd100]

No receipt for 'com.apple.pkg.CLTools_Executables' found at '/'

[nolta]

Yeah, you still need to run xcode-select --install.

[esd100]

Did you see the post from #6244 , where I show that command line tools is installed. There were changes made with CLT 5.1 and Xcode 5.1. It may be the case that particular pkg is no longer used with the new changes. Do you know?

[nolta]

http://stackoverflow.com/a/19899984

[esd100]

Interesting ... thank you for the link. I will look into this and post my results.

[esd100]

Looks like that did the trick.

It looks like one must ensure to install CLT even if you have Xcode 5.1 installed and it says that CLT is already installed with it. Either that or there may be something that could be done with pointing software to the Xcode developments environment where the CLT should be available.

see gist for further details...https://gist.github.com/esd100/9799737

[nolta]

Great, so did you manage to build julia?

[esd100]

Yes. It built successfully on clean system. For computer specs, see #6244. The only modification was the need for openBLAS override. Now, I wonder if the issue with the gfortan 4.9 from HPC, mentioned in previous posts was due to the issue with CLT. I also wonder why the CLT from within XCode 5.1 is not visible from the terminal make command.