Segfault on import PythonCall
#563
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bug
Something isn't working
Comments
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I have a very similar issue with the final julia 1.11.0. The segfault is very non-deterministic. It doesn't always happen and when it happens it doesn't always happen at the same point. Some backtraces look like this: Others like this: Running the same code with julia 1.10.4 doesn't have this issue. |
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I also get seg faults, on linux, only on multithread, in applications which worked with julia 1.10 |
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Fwiw, here's a somewhat self-contained example that reliably crashes for me within a handful of runs (but it's non-deterministic), see this repository. Its only dependencies are import QuadGK
using PythonCall
const camb = pyimport("camb")
const Pm = let
params = camb.set_params(H0=70)
params.set_matter_power(redshifts=0:.1:1.5, kmax=9.5)
res = camb.get_results(params)
power = res.get_matter_power_interpolator(nonlinear=false, k_hunit=false, hubble_units=false, extrap_kmax=1e6).P
(z, k) -> let
pyval = power(z, k)
pyconvert(Float64, pyval)
end
end
calculate_stuff = (R, z) -> let
θ = R/900.
integrand = lθ -> let
kl = lθ/((1+z) * R)
sqrt(lθ)*cos(lθ)*Pm(z, kl) / (θ*θ)
end
QuadGK.quadgk(integrand, 0, 50)[1]
end
zvalues = [0.05, 0.1, 0.15, 0.2, 0.25, 0.3, 0.35, 0.4, 0.45, 0.5, 0.55, 0.6, 0.65, 0.7]
Rvalues = collect(.1:.2:7.0)
@info @. calculate_stuff(Rvalues, zvalues') |
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I get a segmentation error on julia v1.11.2 with another example. This is my system: My example involves just loading HuggingFaceDatasets.jl (which uses PythonCall) from another package. It works fine if just used in a script instead. The error happens at precompilation time. julia> activate .
julia> using GNNDatasets
Precompiling GNNDatasets...
Info Given GNNDatasets was explicitly requested, output will be shown live
[68039] signal 11 (2): Segmentation fault: 11
in expression starting at none:0
_ZN3Aws4Http19CurlHandleContainerD2Ev at /Users/carlo/.julia/dev/GraphNeuralNetworks/GNNDatasets/.CondaPkg/env/lib/libaws-cpp-sdk-core.dylib (unknown line)s
Allocations: 3387461 (Pool: 3387279; Big: 182); GC: 9
✗ GNNDatasets
0 dependencies successfully precompiled in 7 seconds. 171 already precompiled.
ERROR: The following 1 direct dependency failed to precompile:
GNNDatasets
Failed to precompile GNNDatasets [2afd1aaa-255b-4d45-920d-62446192254f] to "/Users/carlo/.julia/compiled/v1.11/GNNDatasets/jl_R2rNZG".
[68039] signal 11 (2): Segmentation fault: 11
in expression starting at none:0
_ZN3Aws4Http19CurlHandleContainerD2Ev at /Users/carlo/.julia/dev/GraphNeuralNetworks/GNNDatasets/.CondaPkg/env/lib/libaws-cpp-sdk-core.dylib (unknown line)
Allocations: 3387461 (Pool: 3387279; Big: 182); GC: I can provide a full reproducer if needed. |
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I'm getting a similar error on Julia 1.10 on Windows. Here is the code that triggers the error. try
import PythonCall
catch
@warn "PythonCall not working :("
endJulia Version 1.10.9
Commit 5595d20a28 (2025-03-10 12:51 UTC)
Build Info:
Official https://julialang.org/ release
Platform Info:
OS: Windows (x86_64-w64-mingw32)
CPU: 4 × AMD EPYC 7763 64-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)Details│
│ To reproduce this CI run locally run the following from the same repository state on julia version 1.10.9:
│
│ `import Pkg; Pkg.test(;coverage=true, julia_args=["--check-bounds=yes", "--compiled-modules=yes", "--depwarn=yes"], force_latest_compatible_version=false, allow_reresolve=true)`
│
Testing ZipArchives
Status `C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\Project.toml`
[4c88cf16] Aqua v0.8.11
[944b1d66] CodecZlib v0.7.8
[36869731] Malt v1.1.2
[6fe1bfb0] OffsetArrays v1.15.0
[6099a3de] PythonCall v0.9.24
[efcf1570] Setfield v1.1.2
[3bb67fe8] TranscodingStreams v0.11.3
[49080126] ZipArchives v2.4.1 `D:\a\ZipArchives.jl\ZipArchives.jl`
[a5390f91] ZipFile v0.10.1
[1e303b3e] LibArchive_jll v3.7.4+0
[2a0f44e3] Base64
[a63ad114] Mmap
[44cfe95a] Pkg v1.10.0
[9a3f8284] Random
[ea8e919c] SHA v0.7.0
[8dfed614] Test
[3f19e933] p7zip_jll v17.4.0+2
Status `C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\Manifest.toml`
[4c88cf16] Aqua v0.8.11
[dce04be8] ArgCheck v2.4.0
[6309b1aa] CodecInflate64 v0.1.3
[944b1d66] CodecZlib v0.7.8
[34da2185] Compat v4.16.0
[992eb4ea] CondaPkg v0.2.26
[187b0558] ConstructionBase v1.5.8
[9a962f9c] DataAPI v1.16.0
[e2d170a0] DataValueInterfaces v1.0.0
[0c81fc1b] InputBuffers v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[692b3bcd] JLLWrappers v1.7.0
[0f8b85d8] JSON3 v1.14.1
[1914dd2f] MacroTools v0.5.15
[36869731] Malt v1.1.2
[0b3b1443] MicroMamba v0.1.14
[6fe1bfb0] OffsetArrays v1.15.0
[bac558e1] OrderedCollections v1.8.0
[69de0a69] Parsers v2.8.1
[fa939f87] Pidfile v1.3.0
[aea7be01] PrecompileTools v1.2.1
[21216c6a] Preferences v1.4.3
[6099a3de] PythonCall v0.9.24
[05181044] RelocatableFolders v1.0.1
[ae029012] Requires v1.3.1
[6c6a2e73] Scratch v1.2.1
[efcf1570] Setfield v1.1.2
[1e83bf80] StaticArraysCore v1.4.3
[856f2bd8] StructTypes v1.11.0
[3783bdb8] TableTraits v1.0.1
[bd369af6] Tables v1.12.0
[3bb67fe8] TranscodingStreams v0.11.3
[e17b2a0c] UnsafePointers v1.0.0
[49080126] ZipArchives v2.4.1 `D:\a\ZipArchives.jl\ZipArchives.jl`
[a5390f91] ZipFile v0.10.1
[1fd713ca] Attr_jll v2.5.2+0
[6e34b625] Bzip2_jll v1.0.9+0
[2e619515] Expat_jll v2.6.5+0
[1e303b3e] LibArchive_jll v3.7.4+0
[94ce4f54] Libiconv_jll v1.18.0+0
[5ced3[41](https://github.com/JuliaIO/ZipArchives.jl/actions/runs/13886192680/job/38851223990?pr=89#step:6:44)a] Lz4_jll v1.10.1+0
[458c3c95] OpenSSL_jll v3.0.16+0
[ffd25f8a] XZ_jll v5.6.4+1
[3161d3a3] Zstd_jll v1.5.7+1
[ed5aba05] acl_jll v2.3.2+0
[f8abcde7] micromamba_jll v1.5.8+0
[4d7b5844] pixi_jll v0.41.3+0
[0dad84c5] ArgTools v1.1.1
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8ba89e20] Distributed
[f43a241f] Downloads v1.6.0
[7b1f6079] FileWatching
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[4af54fe1] LazyArtifacts
[b27032c2] LibCURL v0.6.4
[76f85450] LibGit2
[8f399da3] Libdl
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[ca575930] NetworkOptions v1.2.0
[44cfe95a] Pkg v1.10.0
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA v0.7.0
[9e88b[42](https://github.com/JuliaIO/ZipArchives.jl/actions/runs/13886192680/job/38851223990?pr=89#step:6:45)a] Serialization
[6462fe0b] Sockets
[fa267f1f] TOML v1.0.3
[a4e569a6] Tar v1.10.0
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
[deac9b47] LibCURL_jll v8.4.0+0
[e37daf67] LibGit2_jll v1.6.4+0
[29816b5a] LibSSH2_jll v1.11.0+1
[c8ffd9c3] MbedTLS_jll v2.28.2+1
[14a3606d] MozillaCACerts_jll v2023.1.10
[83775a58] Zlib_jll v1.2.13+1
[8e850ede] nghttp2_jll v1.52.0+1
[3f19e933] p7zip_jll v17.4.0+2
Precompiling packages...
3159.7 ms ✓ ZipArchives
1 dependency successfully precompiled in 5 seconds. 50 already precompiled.
Testing Running tests...
Test Summary: | Pass Total Time
Method ambiguity | 1 1 1.5s
Test Summary: | Pass Total Time
Unbound type parameters | 1 1 0.1s
Test Summary: | Pass Total Time
Undefined exports | 1 1 0.0s
Test Summary: | Pass Total Time
Compare Project.toml and test/Project.toml | 1 1 0.1s
Test Summary: | Pass Total Time
Stale dependencies | 1 1 1.4s
Test Summary: | Pass Total Time
Compat bounds | 4 4 0.2s
Test Summary: | Pass Total Time
Piracy | 1 1 0.1s
Test Summary: | Pass Total Time
Persistent tasks | 1 1 4.6s
Test Summary: | Pass Total Time
bytes2string | 25 25 0.3s
Test Summary: | Pass Total Time
Write and Read zip file IO interface | 25 25 4.0s
Test Summary: | Pass Total Time
check_name_used unit tests | 1999 1999 0.2s
Test Summary: | Pass Total Time
show methods | 7 7 0.8s
CondaPkg Found dependencies: C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\CondaPkg.toml
CondaPkg Resolving changes
+ openssl
+ python
CondaPkg Initialising pixi
│ C:\Users\runneradmin\.julia\artifacts\aa881b8313f97d7b8797934574a1cfe551f85222\bin\pixi.exe
│ init
│ --format pixi
└ C:\Users\RUNNER~1\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg
Created C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\pixi.toml
CondaPkg Wrote C:\Users\RUNNER~1\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\pixi.toml
│ [dependencies]
│ openssl = ">=3, <3.1"
│
│ [dependencies.python]
│ channel = "conda-forge"
│ build = "*cpython*"
│ version = ">=3.8,<4"
│
│ [project]
│ name = ".CondaPkg"
│ platforms = ["win-64"]
│ channels = ["conda-forge"]
│ channel-priority = "strict"
└ description = "automatically generated by CondaPkg.jl"
CondaPkg Installing packages
│ C:\Users\runneradmin\.julia\artifacts\aa881b8313f97d7b8797934574a1cfe551f85222\bin\pixi.exe
│ install
└ --manifest-path C:\Users\RUNNER~1\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\pixi.toml
The default environment has been installed.
Please submit a bug report with steps to reproduce this fault, and any error messages that follow (in their entirety). Thanks.
Exception: EXCEPTION_ACCESS_VIOLATION at 0x7ffb051b3346 -- Py_GetAllocatedBlocks at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
in expression starting at D:\a\ZipArchives.jl\ZipArchives.jl\test\external_unzippers.jl:7
Py_GetAllocatedBlocks at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
Py_GetAllocatedBlocks at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_New at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_DecodeUTF8 at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_AsUCS4Copy at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_AsUCS4Copy at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_FromFormatV at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyErr_BadInternalCall at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyErr_Format at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyObject_GenericGetAttrWithDict at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyObject_GetAttr at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyImport_SetModuleString at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyImport_ImportModuleLevelObject at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyImport_Import at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyImport_Import at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\C\pointers.jl:303
unknown function (ip: 000001d69ea0b3ae)
unknown function (ip: 000001d69ea0a47d)
unknown function (ip: 000001d69ea0a228)
macro expansion at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\Py.jl:132 [inlined]
pyimport at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\builtins.jl:1561
unknown function (ip: 000001d69ea0a14b)
unknown function (ip: 000001d69ea0a08d)
unknown function (ip: 000001d69ea09eab)
pyimport at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\builtins.jl:1562 [inlined]
init_consts at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\consts.jl:205
unknown function (ip: 000001d69ea09e64)
unknown function (ip: 000001d69ea0880d)
unknown function (ip: 000001d69ea08642)
__init__ at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\Core.jl:42
unknown function (ip: 000001d69ea085e5)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_module_run_initializer at C:/workdir/src\toplevel.c:76
run_module_init at .\loading.jl:1193
register_restored_modules at .\loading.jl:1181
_include_from_serialized at .\loading.jl:1126
_require_search_from_serialized at .\loading.jl:1651
_require at .\loading.jl:2008
__require_prelocked at .\loading.jl:1882
jfptr___require_prelocked_84968.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_f__call_in_world at C:/workdir/src\builtins.c:831
#invoke_in_world#3 at .\essentials.jl:926 [inlined]
invoke_in_world at .\essentials.jl:923 [inlined]
_require_prelocked at .\loading.jl:1873
macro expansion at .\loading.jl:1860 [inlined]
macro expansion at .\lock.jl:267 [inlined]
__require at .\loading.jl:1823
jfptr___require_84931.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_f__call_in_world at C:/workdir/src\builtins.c:831
#invoke_in_world#3 at .\essentials.jl:926 [inlined]
invoke_in_world at .\essentials.jl:923 [inlined]
require at .\loading.jl:1816
jfptr_require_84928.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
call_require at C:/workdir/src\toplevel.c:481 [inlined]
eval_import_path at C:/workdir/src\toplevel.c:518
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:805
eval_body at C:/workdir/src\interpreter.c:583
eval_body at C:/workdir/src\interpreter.c:544
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:9[43](https://github.com/JuliaIO/ZipArchives.jl/actions/runs/13886192680/job/38851223990?pr=89#step:6:46) [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
include_string at .\loading.jl:2146
_include at .\loading.jl:2206
include at .\client.jl:494
unknown function (ip: 000001d689ee02eb)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
do_call at C:/workdir/src\interpreter.c:126
eval_value at C:/workdir/src\interpreter.c:223
eval_stmt_value at C:/workdir/src\interpreter.c:174 [inlined]
eval_body at C:/workdir/src\interpreter.c:635
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
include_string at .\loading.jl:2146
_include at .\loading.jl:2206
include at .\client.jl:494
unknown function (ip: 000001d689ee02eb)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
do_call at C:/workdir/src\interpreter.c:126
eval_value at C:/workdir/src\interpreter.c:223
eval_stmt_value at C:/workdir/src\interpreter.c:174 [inlined]
eval_body at C:/workdir/src\interpreter.c:635
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
include_string at .\loading.jl:2146
_include at .\loading.jl:2206
include at .\client.jl:494
unknown function (ip: 000001d689ee02eb)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
do_call at C:/workdir/src\interpreter.c:126
eval_value at C:/workdir/src\interpreter.c:223
eval_stmt_value at C:/workdir/src\interpreter.c:174 [inlined]
eval_body at C:/workdir/src\interpreter.c:635
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
exec_options at .\client.jl:296
_start at .\client.jl:557
jfptr__start_86959.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
true_main at C:/workdir/src\jlapi.c:582
jl_repl_entrypoint at C:/workdir/src\jlapi.c:731
mainCRTStartup at C:/workdir/cli\loader_exe.c:58
BaseThreadInitThunk at C:\Windows\System32\KERNEL32.DLL (unknown line)
RtlUserThreadStart at C:\Windows\SYSTEM32\ntdll.dll (unknown line)
Allocations: 14067838 (Pool: 14055488; Big: 12350); GC: 22
Please submit a bug report with steps to reproduce this fault, and any error messages that follow (in their entirety). Thanks.
Exception: EXCEPTION_ACCESS_VIOLATION at 0x7ffb051b3346 -- Py_GetAllocatedBlocks at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
in expression starting at D:\a\ZipArchives.jl\ZipArchives.jl\test\external_unzippers.jl:7
Py_GetAllocatedBlocks at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
Py_GetAllocatedBlocks at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_New at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_DecodeUTF8 at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_FromString at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
Py_InitializeMain at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
Py_InitializeMain at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
Py_FinalizeEx at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
Py_FinalizeEx at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\C\pointers.jl:303 [inlined]
#37 at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\C\context.jl:194
unknown function (ip: 000001d69ea0c874)
_atexit at .\initdefs.jl:428
jfptr__atexit_83415.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
ijl_atexit_hook at C:/workdir/src\init.c:280
ijl_exit at C:/workdir/src\init.c:207
jl_exception_handler at C:/workdir/src\signals-win.c:337 [inlined]
jl_exception_handler at C:/workdir/src\signals-win.c:229
__julia_personality at C:/workdir/src\win32_ucontext.c:28
_chkstk at C:\Windows\SYSTEM32\ntdll.dll (unknown line)
RtlVirtualUnwind2 at C:\Windows\SYSTEM32\ntdll.dll (unknown line)
KiUserExceptionDispatcher at C:\Windows\SYSTEM32\ntdll.dll (unknown line)
Py_GetAllocatedBlocks at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
Py_GetAllocatedBlocks at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_New at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_DecodeUTF8 at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_AsUCS4Copy at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_AsUCS4Copy at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyUnicode_FromFormatV at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyErr_BadInternalCall at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyErr_Format at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyObject_GenericGetAttrWithDict at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyObject_GetAttr at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyImport_SetModuleString at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyImport_ImportModuleLevelObject at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyImport_Import at C:\Users\runneradmin\AppData\Local\Temp\jl_lpu4Ht\.CondaPkg\.pixi\envs\default\python311.dll (unknown line)
PyImport_Import at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\C\pointers.jl:303
unknown function (ip: 000001d69ea0b3ae)
unknown function (ip: 000001d69ea0a47d)
unknown function (ip: 000001d69ea0a228)
macro expansion at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\Py.jl:132 [inlined]
pyimport at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\builtins.jl:1561
unknown function (ip: 000001d69ea0a14b)
unknown function (ip: 000001d69ea0a08d)
unknown function (ip: 000001d69ea09eab)
pyimport at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\builtins.jl:1562 [inlined]
init_consts at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\consts.jl:205
unknown function (ip: 000001d69ea09e64)
unknown function (ip: 000001d69ea0880d)
unknown function (ip: 000001d69ea08642)
__init__ at C:\Users\runneradmin\.julia\packages\PythonCall\WMWY0\src\Core\Core.jl:42
unknown function (ip: 000001d69ea085e5)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_module_run_initializer at C:/workdir/src\toplevel.c:76
run_module_init at .\loading.jl:1193
register_restored_modules at .\loading.jl:1181
_include_from_serialized at .\loading.jl:1126
_require_search_from_serialized at .\loading.jl:1651
_require at .\loading.jl:2008
__require_prelocked at .\loading.jl:1882
jfptr___require_prelocked_84968.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_f__call_in_world at C:/workdir/src\builtins.c:831
#invoke_in_world#3 at .\essentials.jl:926 [inlined]
invoke_in_world at .\essentials.jl:923 [inlined]
_require_prelocked at .\loading.jl:1873
macro expansion at .\loading.jl:1860 [inlined]
macro expansion at .\lock.jl:267 [inlined]
__require at .\loading.jl:1823
jfptr___require_84931.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_f__call_in_world at C:/workdir/src\builtins.c:831
#invoke_in_world#3 at .\essentials.jl:926 [inlined]
invoke_in_world at .\essentials.jl:923 [inlined]
require at .\loading.jl:1816
jfptr_require_84928.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
call_require at C:/workdir/src\toplevel.c:481 [inlined]
eval_import_path at C:/workdir/src\toplevel.c:518
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:805
eval_body at C:/workdir/src\interpreter.c:583
eval_body at C:/workdir/src\interpreter.c:5[44](https://github.com/JuliaIO/ZipArchives.jl/actions/runs/13886192680/job/38851223990?pr=89#step:6:47)
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
include_string at .\loading.jl:21[46](https://github.com/JuliaIO/ZipArchives.jl/actions/runs/13886192680/job/38851223990?pr=89#step:6:49)
_include at .\loading.jl:2206
include at .\client.jl:494
unknown function (ip: 000001d689ee02eb)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
do_call at C:/workdir/src\interpreter.c:126
eval_value at C:/workdir/src\interpreter.c:223
eval_stmt_value at C:/workdir/src\interpreter.c:174 [inlined]
eval_body at C:/workdir/src\interpreter.c:635
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
include_string at .\loading.jl:2146
_include at .\loading.jl:2206
include at .\client.jl:494
unknown function (ip: 000001d689ee02eb)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
do_call at C:/workdir/src\interpreter.c:126
eval_value at C:/workdir/src\interpreter.c:223
eval_stmt_value at C:/workdir/src\interpreter.c:174 [inlined]
eval_body at C:/workdir/src\interpreter.c:635
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
include_string at .\loading.jl:2146
_include at .\loading.jl:2206
include at .\client.jl:494
unknown function (ip: 000001d689ee02eb)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
do_call at C:/workdir/src\interpreter.c:126
eval_value at C:/workdir/src\interpreter.c:223
eval_stmt_value at C:/workdir/src\interpreter.c:174 [inlined]
eval_body at C:/workdir/src\interpreter.c:635
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
exec_options at .\client.jl:296
_start at .\client.jl:557
jfptr__start_86959.1 at C:\hostedtoolcache\windows\julia\1.10.9\x64\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
true_main at C:/workdir/src\jlapi.c:582
jl_repl_entrypoint at C:/workdir/src\jlapi.c:731
mainCRTStartup at C:/workdir/cli\loader_exe.c:58
BaseThreadInitThunk at C:\Windows\System32\KERNEL32.DLL (unknown line)
RtlUserThreadStart at C:\Windows\SYSTEM32\ntdll.dll (unknown line)
Allocations: 14067838 (Pool: 14055[48](https://github.com/JuliaIO/ZipArchives.jl/actions/runs/13886192680/job/38851223990?pr=89#step:6:51)8; Big: 12350); GC: 22
Package ZipArchives errored during testing
Error: Process completed with exit code 1. |
nhz2
changed the title
import PythonCall
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Affects: PythonCall
Describe the bug
I got a segfault using PythonCall on GitHub CI for Apple M1.
https://github.com/JuliaIO/ZipArchives.jl/actions/runs/11219970406/job/31187122812?pr=82
This seems to be an intermittent issue.
Your system
Additional context
Stack trace:
The text was updated successfully, but these errors were encountered: