GatewayseqAnalysis.json

{	
    "GatewayseqAnalysis.Name":"",
    "GatewayseqAnalysis.SubDir":"",
    "GatewayseqAnalysis.OutputDir":"",
    "GatewayseqAnalysis.DragenCram":"",
    "GatewayseqAnalysis.DragenCramIndex":"",
    "GatewayseqAnalysis.DragenVcf":"",
    "GatewayseqAnalysis.DragenVcfIndex":"",
    "GatewayseqAnalysis.DragenSvVcf":"",
    "GatewayseqAnalysis.DragenSvVcfIndex":"",
    "GatewayseqAnalysis.refFasta":"/storage1/fs1/duncavagee/Active/SEQ/Chromoseq/process/refdata/hg38/all_sequences.fa",
    "GatewayseqAnalysis.ReferenceDict":"/storage1/fs1/duncavagee/Active/SEQ/Chromoseq/process/refdata/hg38/all_sequences.dict",
    "GatewayseqAnalysis.CivicCachePath":"/storage1/fs1/duncavagee/Active/SEQ/GatewaySeq/process/.civicpy/cache.pkl",
    "GatewayseqAnalysis.Vepcache":"/storage1/fs1/gtac-mgi/Active/CLE/reference/VEP_cache",
    "GatewayseqAnalysis.VariantDB":"/storage1/fs1/duncavagee/Active/SEQ/GatewaySeq/process/gwseq.db",
    "GatewayseqAnalysis.GWSeqRepo":"/storage1/fs1/dspencer/Active/spencerlab/dhs/git/cle-gatewayseq",
    "GatewayseqAnalysis.JobGroup":"/cle/wdl/haloplex",
    "GatewayseqAnalysis.Queue":"gtac-mgi"
}