pom.xml

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>
	<groupId>org.biojava</groupId>
	<artifactId>biojava-http</artifactId>
	<version>6.0.0-alpha2</version>
	<name>BioJava HTTP</name>
	<description>HTML/JS based interfaces for BioJava</description>

	<properties>
		<jdk.version>1.8</jdk.version>
		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
		<project.build.targetEncoding>UTF-8</project.build.targetEncoding>
		<maven.build.timestamp.format>yyyyMMdd-HHmm</maven.build.timestamp.format>
		<timestamp>${maven.build.timestamp}</timestamp>
		<slf4j.version>1.7.19</slf4j.version>
		<log4j.version>2.17.1</log4j.version>
		<biojava.version>6.0.0-alpha2</biojava.version>
	</properties>

	<repositories>
		<repository>
			<id>oss.sonatype.org-snapshot</id>
			<url>http://oss.sonatype.org/content/repositories/snapshots</url>
			<releases>
				<enabled>false</enabled>
			</releases>
			<snapshots>
				<enabled>true</enabled>
			</snapshots>
		</repository>
	</repositories>

	<scm>
		<connection>scm:git:git@github.com:biojava/biojava-http.git</connection>
		<developerConnection>scm:git:git@github.com:biojava/biojava-http.git</developerConnection>
		<url>https://github.com/biojava/biojava-http</url>
		<tag>HEAD</tag>
	</scm>
	<issueManagement>
		<url>https://github.com/biojava/biojava-http/issues</url>
		<system>Github</system>
	</issueManagement>

	<dependencies>
		<dependency>
			<groupId>com.sparkjava</groupId>
			<artifactId>spark-core</artifactId>
			<version>2.9.3</version>
		</dependency>

		<dependency>
			<groupId>org.biojava</groupId>
			<artifactId>biojava-core</artifactId>
			<version>${biojava.version}</version>
		</dependency>
		<dependency>
			<groupId>org.biojava</groupId>
			<artifactId>biojava-structure</artifactId>
			<version>${biojava.version}</version>
		</dependency>
		<dependency>
			<groupId>junit</groupId>
			<artifactId>junit</artifactId>
			<version>4.13.2</version>
			<scope>test</scope>
		</dependency>
		<!-- SLF4J API, for compiling -->
		<dependency>
			<groupId>org.slf4j</groupId>
			<artifactId>slf4j-api</artifactId>
			<version>${slf4j.version}</version>
		</dependency>
		<!-- binding for log4j 2 at runtime -->
		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-slf4j-impl</artifactId>
			<version>${log4j.version}</version>
			<!-- runtime scope includes the test scope as well -->
			<scope>runtime</scope>
		</dependency>
		<!-- Log4j API and Core implementation required for binding -->
		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-api</artifactId>
			<version>${log4j.version}</version>
			<!-- runtime scope includes the test scope as well -->
			<scope>runtime</scope>
		</dependency>
		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-core</artifactId>
			<version>${log4j.version}</version>
			<!-- runtime scope includes the test scope as well -->
			<scope>runtime</scope>
		</dependency>

		<dependency>
			<groupId>com.sparkjava</groupId>
			<artifactId>spark-template-handlebars</artifactId>
			<version>2.7.1</version>
		</dependency>

		<dependency>
			<groupId>com.google.code.gson</groupId>
			<artifactId>gson</artifactId>
			<version>2.8.6</version>
		</dependency>
	</dependencies>

	<build>
		<plugins>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-compiler-plugin</artifactId>
				<configuration>
					<fork>true</fork>
					<source>${jdk.version}</source>
					<target>${jdk.version}</target>
					<maxmem>2000m</maxmem>
				</configuration>
			</plugin>

			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-shade-plugin</artifactId>
				<executions>
					<execution>
						<phase>package</phase>
						<goals>
							<goal>shade</goal>
						</goals>
						<configuration>
							<!-- Minimizing removes log4j -->
							<minimizeJar>false</minimizeJar>
							<outputFile>target/${project.artifactId}-full-${project.version}.jar</outputFile>
							<artifactSet>
								<excludes>
									<exclude>junit:junit</exclude>
								</excludes>
							</artifactSet>
							<filters>
								<filter>
									<!-- Exclude signature files -->
									<artifact>*:*</artifact>
									<excludes>
										<exclude>META-INF/*.SF</exclude>
										<exclude>META-INF/*.DSA</exclude>
										<exclude>META-INF/*.RSA</exclude>
									</excludes>
								</filter>
							</filters>
							<transformers>
								<transformer
									implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
									<manifestEntries>
										<Specification-Vendor>BioJava</Specification-Vendor>
										<Implementation-Vendor>BioJava</Implementation-Vendor>
										<Specification-Version>${project.version}</Specification-Version>
										<Implementation-Version>${project.version}</Implementation-Version>
										<Specification-Title>${project.name}</Specification-Title>
										<Implementation-Title>${project.name}</Implementation-Title>
										<Main-Class>org.biojava.http.ServerMain</Main-Class>
										<Build-Date>${build.date}</Build-Date>
										<Build-Number>${buildNumber}</Build-Number>
									</manifestEntries>
								</transformer>
								<!-- This bit merges the various META-INF/services files -->
								<transformer
									implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer" />
							</transformers>
						</configuration>
					</execution>
				</executions>
			</plugin>

			<!-- Include git commit -->
			<plugin>
				<groupId>org.codehaus.mojo</groupId>
				<artifactId>buildnumber-maven-plugin</artifactId>
				<version>1.4</version>
				<executions>
					<execution>
						<id>createbuildnum</id>
						<phase>validate</phase>
						<goals>
							<goal>create</goal>
						</goals>
					</execution>
					<execution>
						<id>createdate</id>
						<phase>validate</phase>
						<goals>
							<goal>create</goal>
						</goals>
						<configuration>
							<format>{0,date,yyyy-MM-dd}</format>
							<items>
								<item>timestamp</item>
							</items>
							<buildNumberPropertyName>build.date</buildNumberPropertyName>
						</configuration>
					</execution>
				</executions>
				<configuration>
					<!-- Allow building with local modifications -->
					<doCheck>false</doCheck>
					<!-- No need to fetch with git -->
					<doUpdate>false</doUpdate>
				</configuration>
			</plugin>
		</plugins>
	</build>
</project>