prepping for review

Author: ddsjoberg

NEWS.md

@@ -1,30 +1,36 @@
 # gtsummary (development version)
 
-* Bug fix in `add_overall.tbl_custom_summary()` due to extraneous arguments being passed to primary function. (#2027)
+### New Features and Functions
 
 * Added function `tbl_hierarchical()`, `tbl_hierarchical_count()`, `tbl_ard_hierarchical()`, `brdg_hierarchical()`, and `pier_summary_hierarchical()`. Consider these functions as a preview. We will be making changes without the full deprecation cycle in the coming releases. (#1872) 
 
 * Adding the `style_*(prefix, suffix)` and  `label_style_*(prefix, suffix)` for adding a string before or after the formatted results. These arguments have not been added to the p-value formatting functions. (#1690)
 
-* Bug fix in `add_p.tbl_survfit()` when the original call included `tbl_survfit(type)` specification. (#2002)
+* Added argument `tbl_ard_summary(overall)`. When `TRUE`, the ARD is parsed into primary ARD and the Overall ARD and we run `tbl_ard_summary() |> add_overall()`. (#1940)
+
+* Added `add_stat_label.tbl_ard_summary()` method. (#1969)
+
+### Other Updates
+
+* Headers in {gt} tables being exported to PDF do not support the `\n` line breaker. Previously, line breakers were stripped from the header in the `print.gtsummary()` S3 method. But this did not apply to users utilizing `as_gt()` to further customize their tables. As a result, the line breaking strip has been migrated to `as_gt()`. (#1960)
 
 * Migrated the `tbl_survfit.list(conf.level)` up to `tbl_survfit.data.frame(conf.level)` where the confidence level is passed to `survival::survfit()`.
 
 * Update in `tbl_ard_summary()` to better handle non-standard ARDs (i.e. not our typical continuous or categorical summaries) by assigning them a default summary type. (#1991)
 
 * Made the `oneway.test()` available in `add_p.tbl_continuous()`. (#1970)
 
-* Added argument `tbl_ard_summary(overall)`. When `TRUE`, the ARD is parsed into primary ARD and the Overall ARD and we run `tbl_ard_summary() |> add_overall()`. (#1940)
+* Removed the deprecated `'aov'` test from the `tests.R` file listing available tests. (#1970)
 
-* Added `add_stat_label.tbl_ard_summary()` method. (#1969)
+* Removed documentation for the `add_overall.tbl_ard_summary(digits)` argument, which was never meant to be a part of this function. (#1975)
 
-* Headers in {gt} tables being exported to PDF do not support the `\n` line breaker. Previously, line breakers were stripped from the header in the `print.gtsummary()` S3 method. But this did not apply to users utilizing `as_gt()` to further customize their tables. As a result, the line breaking strip has been migrated to `as_gt()`. (#1960)
+### Bug Fixes
 
-* Removed the `"tbl_summary-arg:statistic"` theme that was incorrectly added to `tbl_continuous()`.
+* Bug fix in `add_overall.tbl_custom_summary()` due to extraneous argument being passed to `tbl_custom_summary()`. (#2027)
 
-* Removed the deprecated `'aov'` test from the `tests.R` file listing available tests. (#1970)
+* Bug fix in `add_p.tbl_survfit()` when the original call included `tbl_survfit(type)` specification. (#2002)
 
-* Removed documentation for the `add_overall.tbl_ard_summary(digits)` argument, which was never meant to be a part of this function. (#1975)
+* Removed the `"tbl_summary-arg:statistic"` theme that was incorrectly added to `tbl_continuous()`.
 
 # gtsummary 2.0.2
 

R/tbl_ard_hierarchical.R

@@ -83,7 +83,7 @@ tbl_ard_hierarchical <- function(cards,
   tbl_ard_hierarchical_inputs[["data"]] <- NULL
 
   # fill in missing labels -----------------------------------------------------
-  default_label <- default_label <- names(data) |> as.list() |> setNames(names(data))
+  default_label <- default_label <- names(data) |> as.list() |> stats::setNames(names(data))
   label <- c(
     label, default_label[setdiff(names(default_label), names(label))]
   )[c(variables, if ("overall" %in% names(label)) "overall")]

README.md

@@ -1,5 +1,6 @@
 
 <!-- README.md is generated from README.Rmd. Please edit that file -->
+
 <!-- badges: start -->
 
 [![R-CMD-check](https://github.com/ddsjoberg/gtsummary/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/ddsjoberg/gtsummary/actions/workflows/R-CMD-check.yaml)

inst/WORDLIST

@@ -46,6 +46,7 @@ cli
 codebase
 coef
 conf
+coxph
 customizability
 customizable
 der
@@ -61,6 +62,7 @@ forcats
 ftExtra
 ggplot
 ggstats
+glm
 hochberg
 holm
 hommel
@@ -72,6 +74,7 @@ labelled
 lifecycle
 likert
 linebreaks
+lm
 lme
 mL
 mis