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Commit dc26bbd

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martinRenoumartinRenou
authored
Merge pull request #10 from martinRenou/xeus-python-build-addon
Xeus python build addon
2 parents 98d28a7 + fe8bed1 commit dc26bbd

12 files changed

+451
-48
lines changed

‎.github/workflows/build.yml

+130-7
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@@ -6,6 +6,10 @@ on:
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pull_request:
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branches: '*'
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defaults:
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run:
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shell: bash -l {0}
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jobs:
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build:
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runs-on: ubuntu-latest
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pip install build
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python -m build --sdist
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cp dist/*.tar.gz myextension.tar.gz
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pip uninstall -y myextension jupyterlab
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rm -rf myextension
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cp dist/*.tar.gz jupyterlite-xeus-python.tar.gz
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pip uninstall -y jupyterlite-xeus-python jupyterlab
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rm -rf jupyterlite-xeus-python
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- uses: actions/upload-artifact@v2
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with:
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name: myextension-sdist
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path: myextension.tar.gz
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name: jupyterlite-xeus-python-sdist
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path: jupyterlite-xeus-python.tar.gz
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test_isolated:
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needs: build
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architecture: 'x64'
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- uses: actions/download-artifact@v2
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with:
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name: myextension-sdist
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name: jupyterlite-xeus-python-sdist
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- name: Install and Test
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run: |
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set -eux
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# Remove NodeJS, twice to take care of system and locally installed node versions.
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sudo rm -rf $(which node)
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sudo rm -rf $(which node)
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pip install myextension.tar.gz
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pip install jupyterlite-xeus-python.tar.gz
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pip install jupyterlab
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jupyter labextension list 2>&1 | grep -ie "@jupyterlite/xeus-python-kernel.*OK"
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# TODO: add JupyterLite browser check
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# python -m jupyterlab.browser_check --no-chrome-test
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python-tests-mamba-python:
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needs: build
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runs-on: ubuntu-latest
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steps:
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- name: Checkout
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uses: actions/checkout@v2
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- uses: actions/download-artifact@v2
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with:
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name: jupyterlite-xeus-python-sdist
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- name: Setup conda
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uses: conda-incubator/setup-miniconda@v2
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with:
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activate-environment: xeus-python-kernel
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environment-file: environment.yml
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python-version: "3.10"
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mamba-version: "*"
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- name: Make sure the Mamba Python API is available
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run: |
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mamba install mamba
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python -c "from mamba.api import create"
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- name: Install
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run: |
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emsdk install 3.1.2
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emsdk activate 3.1.2
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pip install jupyterlite-xeus-python.tar.gz
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- name: Run tests
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run: pytest -rP tests/test_xeus_python_env.py
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python-tests-mamba:
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needs: build
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runs-on: ubuntu-latest
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steps:
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- name: Checkout
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uses: actions/checkout@v2
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- uses: actions/download-artifact@v2
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with:
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name: jupyterlite-xeus-python-sdist
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- name: Setup conda
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uses: conda-incubator/setup-miniconda@v2
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with:
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activate-environment: xeus-python-kernel
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environment-file: environment.yml
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python-version: "3.10"
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mamba-version: "*"
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- name: Install
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run: |
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emsdk install 3.1.2
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emsdk activate 3.1.2
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pip install jupyterlite-xeus-python.tar.gz
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- name: Run tests
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run: pytest -rP tests/test_xeus_python_env.py
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python-tests-micromamba:
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needs: build
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runs-on: ubuntu-latest
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steps:
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- name: Checkout
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uses: actions/checkout@v2
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- uses: actions/download-artifact@v2
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with:
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name: jupyterlite-xeus-python-sdist
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- name: Install mamba
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uses: mamba-org/provision-with-micromamba@main
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with:
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micromamba-version: "0.22.0"
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environment-file: environment.yml
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environment-name: xeus-python-kernel
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- name: Install
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run: |
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emsdk install 3.1.2
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emsdk activate 3.1.2
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pip install jupyterlite-xeus-python.tar.gz
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- name: Run tests
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run: pytest -rP tests/test_xeus_python_env.py
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python-tests-conda:
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needs: build
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runs-on: ubuntu-latest
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steps:
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- name: Checkout
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uses: actions/checkout@v2
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- uses: actions/download-artifact@v2
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with:
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name: jupyterlite-xeus-python-sdist
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- name: Setup conda
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uses: conda-incubator/setup-miniconda@v2
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with:
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activate-environment: xeus-python-kernel
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environment-file: environment.yml
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python-version: "3.10"
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- name: Install
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run: |
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emsdk install 3.1.2
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emsdk activate 3.1.2
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pip install jupyterlite-xeus-python.tar.gz
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- name: Run tests
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run: pytest -rP tests/test_xeus_python_env.py

‎Dockerfile

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# TODO Try to combine micromamba and emsdk
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# FROM emscripten/emsdk:2.0.32
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FROM mambaorg/micromamba:0.22.0
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FROM mambaorg/micromamba:0.23.1
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ARG MAMBA_DOCKERFILE_ACTIVATE=1
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ARG PYTHON_VERSION=3.10
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RUN micromamba install --yes -c https://repo.mamba.pm/conda-forge \
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git pip python=$PYTHON_VERSION click typer
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RUN micromamba install --yes -c conda-forge \
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git pip python=$PYTHON_VERSION click typer emsdk
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##################################################################
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# Install emboa
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# Install empack
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##################################################################
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RUN pip install git+https://github.com/emscripten-forge/emboa
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RUN pip install empack
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##################################################################
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# Setup emsdk
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##################################################################
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RUN git clone https://github.com/emscripten-core/emsdk.git && \
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pushd emsdk && \
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./emsdk install 3.1.2 && \
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popd
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RUN emsdk install 3.1.2 && emsdk activate 3.1.2
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##################################################################
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# Create emscripten env and pack it
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##################################################################
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RUN micromamba create -n xeus-python-kernel \
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--platform=emscripten-32 \
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--root-prefix=/tmp/xeus-python-kernel \
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-c https://repo.mamba.pm/emscripten-forge \
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-c https://repo.mamba.pm/conda-forge \
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--yes \
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python=$PYTHON_VERSION xeus-python \
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numpy matplotlib
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python=$PYTHON_VERSION xeus-python
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RUN mkdir -p xeus-python-kernel && cd xeus-python-kernel && \
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export FILE_PACKAGER=/tmp/emsdk/upstream/emscripten/tools/file_packager.py && \
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/tmp/emsdk/emsdk activate 3.1.2 3.1.2 && \
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cp $MAMBA_ROOT_PREFIX/envs/xeus-python-kernel/bin/xpython_wasm.js . && \
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cp $MAMBA_ROOT_PREFIX/envs/xeus-python-kernel/bin/xpython_wasm.wasm . && \
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emboa pack python core $MAMBA_ROOT_PREFIX/envs/xeus-python-kernel --version=$PYTHON_VERSION
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cp /tmp/xeus-python-kernel/envs/xeus-python-kernel/bin/xpython_wasm.js . && \
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cp /tmp/xeus-python-kernel/envs/xeus-python-kernel/bin/xpython_wasm.wasm . && \
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empack pack python core /tmp/xeus-python-kernel/envs/xeus-python-kernel --version=$PYTHON_VERSION
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COPY copy_output.sh .
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‎MANIFEST.in

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include LICENSE
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include *.md
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include *.yml
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include pyproject.toml
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include package.json
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include install.json
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include ts*.json
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include yarn.lock
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include webpack.config.js
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recursive-include tests *.py
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graft jupyterlite_xeus_python/labextension
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‎environment.yml

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name: xeus-python-kernel
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channels:
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- conda-forge
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dependencies:
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- python
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- pip
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- pytest
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- emsdk
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- pip:
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- jupyterlite
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- empack

‎jupyterlite_xeus_python/__init__.py

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import json
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from pathlib import Path
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def _jupyter_labextension_paths():
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return [{
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"src": "labextension",
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"dest": data["name"]
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}]
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return [{"src": "labextension", "dest": data["name"]}]

‎jupyterlite_xeus_python/_version.py

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__all__ = ["__version__"]
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def _fetchVersion():
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HERE = Path(__file__).parent.resolve()
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raise FileNotFoundError(f"Could not find package.json under dir {HERE!s}")
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__version__ = _fetchVersion()

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