Activity
fix: simplify add_format_field
fix: simplify add_format_field
fix: change wildcard to fixed value for normed truth (merging happens…
fix: change wildcard to fixed value for normed truth (merging happens…
fix: remove comment with fixed path
fix: remove comment with fixed path
fix: trying to fix mismatching wildcards problems
fix: trying to fix mismatching wildcards problems
fix: add rule merge_callsets for snv/indel callsets
fix: add rule merge_callsets for snv/indel callsets
Update workflow/rules/download.smk
Update workflow/rules/download.smk
Apply suggestions from code review
Apply suggestions from code review
fix: fix wrong path
fix: fix wrong path
fix: Trying to fix problems with format field in truth
fix: Trying to fix problems with format field in truth
fix: input to function and params
fix: input to function and params
fix: add checking for FORMAT field prior to addition
fix: add checking for FORMAT field prior to addition
fix: catch when FORMAT field is present in truth
fix: catch when FORMAT field is present in truth
chore: release 1.12.0
chore: release 1.12.0
Force push
feat: automate picking of rename file based on reference genome used …
feat: automate picking of rename file based on reference genome used …
Pull request merge
fix: Add error handling for missing configuration.
fix: Add error handling for missing configuration.
Add error handling for missing configuration and invalid values.
Add error handling for missing configuration and invalid values.
fix: seqc2-wgs is a low coverage dataset
fix: seqc2-wgs is a low coverage dataset
fix: remove commented out lines
fix: remove commented out lines
fix: get reference genome from ncbi
fix: get reference genome from ncbi
fix: change grch37 flag to reference-genome flag in presets
fix: change grch37 flag to reference-genome flag in presets
fix: add rename contigs flag
fix: add rename contigs flag
fix: add genome-build to test preset
fix: add genome-build to test preset