feature: ✨ fix syntax by adding missing commas in function signatures

[Anselmoo]

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  Pull Requests for the same
  update/change?

New ✨✨ Feature-Submissions:

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• Does your submission pass tests?
• Have you lint your code locally prior to submission? Fixed: [Feature]: Introduce RUFF #1655
• This PR is for a new feature, not a bug fix.

Changes to ⚙️ Core-Features:

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Summary by Sourcery

Fix syntax errors by adding missing commas in function signatures and enhance pre-commit configuration by replacing multiple hooks with ruff and ruff-format for code formatting and linting.

Bug Fixes:

• Add missing commas in function signatures to fix syntax errors.

Enhancements:

• Replace multiple pre-commit hooks with ruff and ruff-format for code formatting and linting.

[semanticdiff-com]

Review changes with SemanticDiff.

Analyzed 2 of 8 files.

Overall, the semantic diff is 100% smaller than the GitHub diff.

2 files do not contain logic changes.

	Filename	Status
❔	.pre-commit-config.yaml	Unsupported file format
❔	poetry.lock	Unsupported file format
❔	pyproject.toml	Unsupported file format
✔️	spectrafit/utilities/transformer.py	No logic changes found
✔️	spectrafit/api/test/test_pptx_model.py	No logic changes found
❔	docs/examples/example9_2.ipynb	Unsupported file format
❔	docs/examples/example9_3.ipynb	Unsupported file format
❔	docs/examples/example9_6.ipynb	Unsupported file format

[sourcery-ai]

Reviewer's Guide by Sourcery

This pull request focuses on improving code quality and updating development tools. The main changes include updating pre-commit hooks, fixing syntax issues, and adjusting code formatting configurations.

Class diagram for updated function signatures

classDiagram
    class test_pptx_data {
        +pptx_data: Tuple[PPTXDataAPI, OutputAPI, InputAPI, SolverAPI],
        +test_pptx_data(pptx_data: Tuple[PPTXDataAPI, OutputAPI, InputAPI, SolverAPI])
    }
    class list2dict {
        +peak_list: List[Dict[str, Dict[str, Dict[str, Any]]]],
        +list2dict(peak_list: List[Dict[str, Dict[str, Dict[str, Any]]]])
    }
    note for test_pptx_data "Added missing comma in function signature"
    note for list2dict "Added missing comma in function signature"

Loading

Pre-commit hooks update

graph TD;
    A[Old Pre-commit Hooks] -->|Removed| B[black, blacken-docs, isort, flake8, pylint, pyupgrade]
    A -->|Added| C[ruff, ruff-format]
    A -->|Unchanged| D[mypy, pydocstyle, prettier]

Loading

File-Level Changes

Change	Details	Files
Update pre-commit configuration	Replace Black, isort, and flake8 with Ruff for linting and formatting Remove Pylint hook Remove pyupgrade hook Update versions of remaining hooks	.pre-commit-config.yaml
Fix syntax by adding missing commas in function signatures	Add missing comma in function parameter type hint Add missing comma in function parameter type hint	spectrafit/api/test/test_pptx_model.py spectrafit/utilities/transformer.py

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[sourcery-ai]

Hey @Anselmoo - I've reviewed your changes - here's some feedback:

Overall Comments:

• Consider adding a brief explanation in the project documentation about the switch to Ruff and its implications for the development workflow. This will help other contributors understand the change in linting and formatting tools.

Here's what I looked at during the review

• 🟢 General issues: all looks good
• 🟢 Security: all looks good
• 🟢 Testing: all looks good
• 🟢 Complexity: all looks good
• 🟢 Documentation: all looks good

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[sonarqubecloud]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarCloud

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 100.00%. Comparing base (03f6a32) to head (d646348).
Report is 1 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff            @@
##              main     #1656   +/-   ##
=========================================
  Coverage   100.00%   100.00%           
=========================================
  Files           45        45           
  Lines         4518      4518           
=========================================
  Hits          4518      4518           

Flag	Coverage Δ
unittests	100.00% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Files with missing lines	Coverage Δ
spectrafit/api/test/test_pptx_model.py	100.00% <ø> (ø)
spectrafit/utilities/transformer.py	100.00% <ø> (ø)