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Replace mcflirt with 3dVolreg #1535

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chrisgorgo opened this issue Mar 12, 2019 · 3 comments
Open

Replace mcflirt with 3dVolreg #1535

chrisgorgo opened this issue Mar 12, 2019 · 3 comments
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effort: medium Estimated medium effort task feature impact: high Estimated high impact task
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22.x

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@chrisgorgo
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@chrisgorgo chrisgorgo added feature impact: low Estimated low impact task effort: medium Estimated medium effort task labels Mar 12, 2019
@oesteban oesteban mentioned this issue Mar 12, 2019
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@oesteban oesteban added this to the 2.0.0 milestone Jul 11, 2019
@oesteban
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This would be nice to finish up, but we need to figure out nipy/nitransforms#45 first.

@oesteban oesteban added impact: high Estimated high impact task and removed impact: low Estimated low impact task labels Jun 5, 2020
@oesteban oesteban modified the milestones: 20.4.0, 20.3.0 Jun 5, 2020
@oesteban oesteban modified the milestones: 20.3.0, 21.x Jul 19, 2021
@jbh1091
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jbh1091 commented Sep 25, 2023

With nipy/nitransforms#45 closed as completed, is this now doable?

I see an example implementation in fmriprep-rodents (nipreps/fmriprep-rodents#15) but it looks like that workflow is not actually used anywhere.

@effigies
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Yes, I think it should be.

@tsalo tsalo removed the blocked label Nov 12, 2024
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[FIX] Replace FSL mcflirt with AFNI 3dVolReg nipreps/fmriprep
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@effigies @chrisgorgo @oesteban @tsalo @jbh1091