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Implement AFNI affines on oblique datasets #45

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oesteban opened this issue Oct 31, 2019 · 0 comments · Fixed by #117
Closed

Implement AFNI affines on oblique datasets #45

oesteban opened this issue Oct 31, 2019 · 0 comments · Fixed by #117
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CZI month 1

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@oesteban
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Our framework chokes in this use case. Prior knowledge on the topic is found here: afni/afni#116
@oesteban oesteban mentioned this issue Nov 15, 2019
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oesteban added a commit to oesteban/nitransforms that referenced this issue Nov 15, 2019
@oesteban
fix: first stab at AFNI obliques
ad584e4 
Close nipy#45, reduce some xfails (nipy#40)
@oesteban oesteban mentioned this issue Nov 27, 2019
Open
@oesteban oesteban added this to the 20.0.0 milestone Mar 19, 2020
@oesteban oesteban mentioned this issue Jan 15, 2021
Open
@oesteban oesteban modified the milestones: 20.0.0, CZI month 1 Jun 18, 2021
oesteban added a commit that referenced this issue Jul 2, 2021
@oesteban
FIX: Implement AFNI's deoblique operations
56f28c1 
Finalize the interpretation in I/O of AFNI's linear matrices when reference
or moving data are oblique w.r.t. the canonical axes.

Resolves: #45.
@oesteban oesteban mentioned this issue Jul 2, 2021
Merged
oesteban added a commit that referenced this issue Nov 11, 2021
@oesteban
FIX: Implement AFNI's deoblique operations
cb6e119 
Finalize the interpretation in I/O of AFNI's linear matrices when reference
or moving data are oblique w.r.t. the canonical axes.

Resolves: #45.
oesteban added a commit that referenced this issue Feb 16, 2022
@oesteban
FIX: Implement AFNI's deoblique operations
dc476c0 
Finalize the interpretation in I/O of AFNI's linear matrices when reference
or moving data are oblique w.r.t. the canonical axes.

Resolves: #45.
oesteban added a commit that referenced this issue Feb 17, 2022
@oesteban
FIX: Implement AFNI's deoblique operations
72fdcf8 
Finalize the interpretation in I/O of AFNI's linear matrices when reference
or moving data are oblique w.r.t. the canonical axes.

Resolves: #45.
@oesteban oesteban mentioned this issue Feb 22, 2022
Closed
oesteban added a commit that referenced this issue Feb 23, 2022
@oesteban
FIX: Implement AFNI's deoblique operations
9fb301e 
Finalize the interpretation in I/O of AFNI's linear matrices when reference
or moving data are oblique w.r.t. the canonical axes.

Resolves: #45.
oesteban added a commit that referenced this issue Feb 24, 2022
@oesteban
FIX: Implement AFNI's deoblique operations
bf249ca 
Finalize the interpretation in I/O of AFNI's linear matrices when reference
or moving data are oblique w.r.t. the canonical axes.

Resolves: #45.
oesteban added a commit that referenced this issue Feb 25, 2022
@oesteban
fix: finishing up this PR
38202bb 
With the generous support from Paul Taylor <@mrneont> and his answers in
afni/afni#353, I have managed to get all tests to PASS.

I am not resolving the problem of oblique datasets for displacements
fields this time.

Resolves: #45.
Resolves: #150.
Continues: #157.
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FIX: Implement AFNI's deoblique operations nipy/nitransforms
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