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REL: 2.4.0 #740

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merged 9 commits into from
Apr 1, 2019
Merged

REL: 2.4.0 #740

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610ad5d
DOC: Changelog skeleton
effigies Mar 15, 2019
61345da
MNT/DOC: Update mailmap, zenodo, author list
effigies Mar 15, 2019
570cdc1
MAINT: Version 2.4.0
effigies Mar 15, 2019
17fdcc0
Merge remote-tracking branch 'upstream/master' into rel/2.4.0
effigies Mar 19, 2019
6d031e3
MNT: Update author list, mailmap, zenodo
effigies Mar 19, 2019
42f3c9b
DOC: Update changelog
effigies Mar 19, 2019
8e81d32
Merge remote-tracking branch 'upstream/master' into rel/2.4.0
effigies Apr 1, 2019
1672e99
DOC: Update changelog, zenodo
effigies Apr 1, 2019
5319580
DOC: Add Matt Cieslak to author list
effigies Apr 1, 2019
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5 changes: 3 additions & 2 deletions .mailmap
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Expand Up @@ -38,18 +38,19 @@ Jean-Baptiste Poline <[email protected]> jbpoline <[email protected]>
Jon Haitz Legarreta <[email protected]> Jon Haitz Legarreta Gorroño <[email protected]>
Kesshi Jordan <[email protected]> kesshijordan <[email protected]>
Kevin S. Hahn <[email protected]> Kevin S. Hahn <[email protected]>
Konstantinos Raktivan <[email protected]> constracti <[email protected]>
Krish Subramaniam <[email protected]> Krish Subramaniam <[email protected]>
Marc-Alexandre Côté <[email protected]> Marc-Alexandre Cote <[email protected]>
Mathias Goncalves <[email protected]> mathiasg <[email protected]>
Michael Hanke <[email protected]> <mhanke-guest@82381867-18eb-0310-98a2-9474e637aba2>
Michael Hanke <[email protected]> <[email protected]>
Nguyen, Ly <[email protected]> lxn2 <[email protected]>
Ly Nguyen <[email protected]> lxn2 <[email protected]>
Oliver P. Hinds <[email protected]> ohinds <[email protected]>
Paul McCarthy <[email protected]> Paul McCarthy <[email protected]>
Satrajit Ghosh <[email protected]> Satrajit Ghosh <[email protected]>
Serge Koudoro <[email protected]> skoudoro <[email protected]>
Stephan Gerhard <[email protected]> Stephan Gerhard <[email protected]>
Thomas Roos <[email protected]> Roosted7 <[email protected]>
Venky Reddy <[email protected]> R3DDY97 <[email protected]>
Venkateswara Reddy Reddam <[email protected]> R3DDY97 <[email protected]>
Yaroslav O. Halchenko <[email protected]> <yoh-guest@82381867-18eb-0310-98a2-9474e637aba2>
Yaroslav O. Halchenko <[email protected]> Yaroslav Halchenko <[email protected]>
36 changes: 25 additions & 11 deletions .zenodo.json
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Expand Up @@ -38,6 +38,11 @@
"name": "Halchenko, Yaroslav O.",
"orcid": "0000-0003-3456-2493"
},
{
"affiliation": "Wellcome Centre for Integrative Neuroimaging, University of Oxford, UK",
"name": "Cottaar, Michiel",
"orcid": "0000-0003-4679-7724"
},
{
"affiliation": "MIT, HMS",
"name": "Ghosh, Satrajit",
Expand Down Expand Up @@ -82,11 +87,6 @@
{
"name": "Moloney, Brendan"
},
{
"affiliation": "Wellcome Centre for Integrative Neuroimaging, University of Oxford, UK",
"name": "Cottaar, Michiel",
"orcid": "0000-0003-4679-7724"
},
{
"name": "Burns, Christopher"
},
Expand Down Expand Up @@ -162,6 +162,11 @@
{
"name": "Nguyen, Ly"
},
{
"affiliation": "BrainSpec, Boston, MA",
"name": "Reddigari, Samir",
"orcid": "0000-0003-1472-5881"
},
{
"name": "St-Jean, Samuel"
},
Expand All @@ -178,6 +183,11 @@
"name": "Kaczmarzyk, Jakub",
"orcid": "0000-0002-5544-7577"
},
{
"affiliation": "Universit\u00e9 de Sherbrooke",
"name": "Legarreta, Jon Haitz",
"orcid": "0000-0002-9661-1396"
},
{
"name": "Hahn, Kevin S."
},
Expand All @@ -192,11 +202,6 @@
"name": "Poline, Jean-Baptiste",
"orcid": "0000-0002-9794-749X"
},
{
"affiliation": "Universit\u00e9 de Sherbrooke",
"name": "Legarreta, Jon Haitz",
"orcid": "0000-0002-9661-1396"
},
{
"affiliation": "University College London, London, UK",
"name": "Stutters, Jon",
Expand All @@ -207,6 +212,9 @@
"name": "Jordan, Kesshi",
"orcid": "0000-0001-6313-0580"
},
{
"name": "Cieslak, Matt"
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@mattcieslak Let me know if you have another name you prefer for publications, your affiliation, and your ORCID. (Sorry if you've given this to me in another package, but I couldn't find it from a quick look.)

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Here it is @effigies

    {
      "name": "Cieslak, Matthew",
      "affiliation": "Department of Neuropsychiatry, University of Pennsylvania",
      "orcid": "0000-0002-1931-4734"
    },

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Gah, just a few minutes too late! I'll have it in for the 2.4.1 release.

},
{
"name": "Moreno, Miguel Estevan"
},
Expand Down Expand Up @@ -247,6 +255,10 @@
"name": "Leinweber, Katrin",
"orcid": "0000-0001-5135-5758"
},
{
"affiliation": "National Technical University of Athens, Greece",
"name": "Raktivan, Konstantinos"
},
{
"affiliation": "Friedrich-Alexander-Universit\u00e4t Erlangen-N\u00fcrnberg, Erlangen, Germany",
"name": "Fischer, Peter",
Expand All @@ -265,7 +277,9 @@
"name": "Roos, Thomas"
},
{
"name": "Reddy, Venky"
"affiliation": "National Institute of Mental Health and Neuro-Sciences, India",
"name": "Reddam, Venkateswara Reddy",
"orcid": "0000-0001-6817-2966"
},
{
"name": "freec84"
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39 changes: 39 additions & 0 deletions Changelog
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Expand Up @@ -25,6 +25,45 @@ Eric Larson (EL), Demien Wasserman, and Stephan Gerhard.

References like "pr/298" refer to github pull request numbers.

2.4.0 (Monday 1 April 2019)
============================

New features
------------
* Alternative ``Axis``-based interface for manipulating CIFTI-2 headers
(pr/641) (Michiel Cottaar, reviewed by Demien Wasserman, CM, SG)

Enhancements
------------
* Accept TCK files produced by tools with other delimiter/EOF defaults
(pr/720) (Soichi Hayashi, reviewed by CM, MB, MC)
* Allow BrainModels or Parcels to contain a single vertex in CIFTI
(pr/739) (Michiel Cottaar, reviewed by CM)
* Support for ``NIFTI_XFORM_TEMPLATE_OTHER`` xform code (pr/743) (CM)

Bug fixes
---------
* Skip refcheck in ArraySequence construction/extension (pr/719) (Ariel
Rokem, reviewed by CM, MC)
* Use safe resizing for ArraySequence extension (pr/724) (CM, reviewed
by MC)
* Fix typo in error message (pr/726) (Jon Haitz Legarreta Gorroño,
reviewed by CM)
* Support DICOM slice sorting in Python 3 (pr/728) (Samir Reddigari,
reviewed by CM)
* Correctly reorient dim_info when reorienting NIfTI images
(Konstantinos Raktivan, CM, reviewed by CM)

Maintenance
-----------
* Import updates to reduce upstream deprecation warnings (pr/711,
pr/705, pr/738) (EL, YOH, reviewed by CM)
* Delay import of ``nibabel.testing``, ``nose`` and ``mock`` to speed up
import (pr/699) (CM)
* Increase coverage testing, drop coveralls (pr/722, pr/732) (CM)
* Add Zenodo metadata, sorted by commits (pr/732) (CM + others)
* Update author listing and copyrights (pr/742) (MB, reviewed by CM)

2.3.3 (Wednesday 16 January 2019)
=================================

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4 changes: 4 additions & 0 deletions doc/source/index.rst
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Expand Up @@ -92,6 +92,10 @@ contributed code and discussion (in rough order of appearance):
* Igor Solovey
* Jon Haitz Legarreta Gorroño
* Katrin Leinweber
* Soichi Hayashi
* Samir Reddigari
* Konstantinos Raktivan
* Matt Cieslak

License reprise
===============
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4 changes: 2 additions & 2 deletions nibabel/info.py
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Expand Up @@ -19,8 +19,8 @@
_version_major = 2
_version_minor = 4
_version_micro = 0
_version_extra = 'dev'
# _version_extra = ''
# _version_extra = 'dev'
_version_extra = ''

# Format expected by setup.py and doc/source/conf.py: string of form "X.Y.Z"
__version__ = "%s.%s.%s%s" % (_version_major,
Expand Down