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Automatically recognize BED vs TSV files and add the option -C, --coords Windows/MinGW-W64 CI #183: Pull request #1894 opened by pd3
March 7, 2025 15:32 4m 45s pd3:develop
pd3:develop
March 7, 2025 15:32 4m 45s
update to fail on duplicate LN tags, with different LN values (#1882) Windows/MinGW-W64 CI #182: Commit 386de25 pushed by daviesrob
March 6, 2025 09:43 4m 47s develop
develop
March 6, 2025 09:43 4m 47s
Clarify bam_set1 parameter documentation. Windows/MinGW-W64 CI #181: Commit 2611e65 pushed by whitwham
February 28, 2025 15:08 5m 1s develop
develop
February 28, 2025 15:08 5m 1s
Clarify bam_set1 parameter documentation. Windows/MinGW-W64 CI #180: Pull request #1891 synchronize by whitwham
February 28, 2025 15:01 4m 43s cjw85:patch-1
cjw85:patch-1
February 28, 2025 15:01 4m 43s
This fixes broken tests due to msys2 changes. (#1892) Windows/MinGW-W64 CI #179: Commit 5057d66 pushed by vasudeva8
February 28, 2025 12:18 4m 41s develop
develop
February 28, 2025 12:18 4m 41s
Fix broken tests due to MSYS2 changes. Windows/MinGW-W64 CI #178: Pull request #1892 synchronize by whitwham
February 28, 2025 10:22 4m 43s whitwham:ci_cygwin_fix
whitwham:ci_cygwin_fix
February 28, 2025 10:22 4m 43s
Fix broken tests due to MSYS2 changes. Windows/MinGW-W64 CI #177: Pull request #1892 opened by whitwham
February 28, 2025 10:16 4m 46s whitwham:ci_cygwin_fix
whitwham:ci_cygwin_fix
February 28, 2025 10:16 4m 46s
Clarify bam_set1 parameter documentation. Windows/MinGW-W64 CI #176: Pull request #1891 opened by cjw85
February 25, 2025 18:12 4m 46s cjw85:patch-1
cjw85:patch-1
February 25, 2025 18:12 4m 46s
update to tabix with easy validation for a few file formats Windows/MinGW-W64 CI #175: Pull request #1890 opened by vasudeva8
February 19, 2025 12:32 4m 41s vasudeva8:easytbx
vasudeva8:easytbx
February 19, 2025 12:32 4m 41s
exits with return value 1 on tabix parse error Windows/MinGW-W64 CI #174: Commit 243e97e pushed by whitwham
February 14, 2025 14:56 4m 43s develop
develop
February 14, 2025 14:56 4m 43s
update to fail on duplicate LN tags, with different LN values Windows/MinGW-W64 CI #173: Pull request #1882 synchronize by vasudeva8
February 14, 2025 11:57 4m 38s vasudeva8:SQ
vasudeva8:SQ
February 14, 2025 11:57 4m 38s
Make HAVE_ATTRIBUTE_TARGET check also check SSSE3 intrinsics work Windows/MinGW-W64 CI #172: Commit 1682e5e pushed by daviesrob
February 13, 2025 16:24 4m 53s develop
develop
February 13, 2025 16:24 4m 53s
exits with return value 1 on tabix parse error Windows/MinGW-W64 CI #171: Pull request #1887 opened by vasudeva8
February 10, 2025 14:23 5m 19s vasudeva8:tbx
vasudeva8:tbx
February 10, 2025 14:23 5m 19s
Make HAVE_ATTRIBUTE_TARGET check also check that SSSE3 intrinsics work Windows/MinGW-W64 CI #170: Pull request #1886 opened by jmarshall
February 10, 2025 07:55 4m 56s jmarshall:ssse3-configure
jmarshall:ssse3-configure
February 10, 2025 07:55 4m 56s
update to fail on duplicate LN tags, with different LN values Windows/MinGW-W64 CI #169: Pull request #1882 synchronize by vasudeva8
February 6, 2025 10:43 4m 32s vasudeva8:SQ
vasudeva8:SQ
February 6, 2025 10:43 4m 32s
Reset variant types after updating alleles Windows/MinGW-W64 CI #168: Commit c814d39 pushed by daviesrob
January 30, 2025 15:39 4m 40s develop
develop
January 30, 2025 15:39 4m 40s
Reset variant types after updating alleles Windows/MinGW-W64 CI #167: Pull request #1883 opened by daviesrob
January 28, 2025 11:17 4m 42s daviesrob:var-type-reset
daviesrob:var-type-reset
January 28, 2025 11:17 4m 42s
Add hts_tpool_worker_id() API Windows/MinGW-W64 CI #166: Commit 2578c89 pushed by whitwham
January 28, 2025 10:05 4m 52s develop
develop
January 28, 2025 10:05 4m 52s
update to fail on duplicate LN tags, with different LN values Windows/MinGW-W64 CI #165: Pull request #1882 opened by vasudeva8
January 27, 2025 19:55 4m 49s vasudeva8:SQ
vasudeva8:SQ
January 27, 2025 19:55 4m 49s
Remove UR:file:// and UR:ftp:// from ref search path, plus REF_PATH to EBI Windows/MinGW-W64 CI #164: Pull request #1881 synchronize by jkbonfield
January 27, 2025 17:28 4m 48s jkbonfield:no-ebi-ref
jkbonfield:no-ebi-ref
January 27, 2025 17:28 4m 48s
Remove UR:file:// and UR:ftp:// from ref search path, plus REF_PATH to EBI Windows/MinGW-W64 CI #163: Pull request #1881 opened by jkbonfield
January 27, 2025 17:21 3m 17s jkbonfield:no-ebi-ref
jkbonfield:no-ebi-ref
January 27, 2025 17:21 3m 17s
Make it possible to test for VCF_REF as declared in the documentation Windows/MinGW-W64 CI #162: Commit c6c1d19 pushed by daviesrob
January 27, 2025 16:35 5m 18s develop
develop
January 27, 2025 16:35 5m 18s
Remove cram seek ability to do range queries via SEEK_CUR. Windows/MinGW-W64 CI #161: Commit 1f338eb pushed by daviesrob
January 27, 2025 15:18 4m 55s develop
develop
January 27, 2025 15:18 4m 55s
Remove cram seek ability to do range queries via SEEK_CUR. Windows/MinGW-W64 CI #160: Pull request #1878 synchronize by jkbonfield
January 27, 2025 15:09 4m 39s jkbonfield:fix_1877
jkbonfield:fix_1877
January 27, 2025 15:09 4m 39s
Make it possible to test for VCF_REF as declared in the documentation Windows/MinGW-W64 CI #159: Pull request #1879 opened by pd3
January 25, 2025 11:29 4m 42s pd3:develop
pd3:develop
January 25, 2025 11:29 4m 42s